I definitely think no glass. IMO having lots of evaporation is a great thing, because it allows you to add more kalkwasser, which is a great, easy, cheap way to supplement ca and alk. I think the light transmission is a big issue. Unless you clean a glass cover daily, it's probably blocking some light. Condensation builds up on it, and that scatters the light too. Plus glass is not 100% transparent. It reflects some light - a lot of light at low angles, so the ends of your tank will not get as much light.
For most reef tanks, the bottom line is heat, because most tanks will overheat with intense lighting and a cover. If you are using a cover, make sure you are paying close attention to your temp on the first warm days of spring, because that's when it might cook the tank.